Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827420.1_cds_XP_016503073.1_16649
CDS Infomation

[gene=LOC107821168] [db_xref=GeneID:107821168] [protein=protein trichome birefringence-like 14] [protein_id=XP_016503073.1] [location=complement(join(15916..16744,17213..17408,17664..17813,18207..18497,19149..19293))] [gbkey=CDS]
Sequence

ATGAAGGGAGGTTTGAAGGTGTCACAGATCTCTCTCATCCTTATTGGATTCGTATGTGCT
ACTGTTCTTCTTTTGGCATATGTGAAAAGCCTATTTCTTTCTTCTCCAGTACTACCTCAG
AACCATGTGCTCCAGCTTTCTCCAGATCTTAAAGTGAAAGATGAAGAAGCTTTGGTTGAA
GGAAGCGGTTTGGGCCAATCAGAAGAAAGTGTAAACTTGGTATCCGAGAAATATTCTACT
TATACAAACTCTTCACCAGCGATTAAGGTGACTGAAGAATTGATTTCTCATGATAAAGAA
GCTTTGGGAGAAGGAGGCGGATCGGGGCAAGTAGAAGAAAGTGTTAACTTTGAATCTGAA
AAATATTCTACTTATACAAACTCTTCACCAGTGATTAAGGTGTCTGAAGAATTGAGTACT
CGTGAAGAAATAGGAGGTGGTGCTCCCAACTTTACTAAAAAGGGAGATCTAAAAGATGTT
TCAGACAAGAAAATTGGTTCAATAAAACAGCAAACTGACGTTTCCACTCCTGTGAGTTCT
GGGGGTGAACATAGTAAAAATTTGACAACCACCCTGAAAAGACAAGGTTGTCGCTTTGCT
AAAGGCAGATGGGTTGTAGATGATAGCCGACCGTTATATTCTGGATTTGGCTGCAAGCAA
TGGTTGTCATCTATGTGGGCTTGCCGTTTGACACAACGTACAGATTTTGAATACGAGAAG
TTACGTTGGCGACCAAAAGATTGTCAGATGGACGAGTTTACAGGAGTTAAATTTCTAAAA
AGGATGCAAAACAAGACTCTGGCTTTTATTGGGGATTCGCTCGGTAGACAGCAATTTCAA
TCACTTATGTGTATGATTACTGGTGGAAAAGATAGACCCAATGTTCTTGATGTGGGGCAT
GAGTATGGTCTTGTCCAATCTCGTGGTTCTGCTCGACCTGATGGATGGGCTTATCGATTT
CCAGACACCAAAACAACTATTCTTTACTATTGGTCTGCTAGTCTCTGTGACTTGACACCC
ATAAATCCATCCGACCCTGCTACTGATTACGCCATGCACTTGGACCGTCCACCAGCATTT
TTGAGTCATTTTCTTCCAAAGTTTGATGTTGTTGTCTTAAACACAGGACACCACTGGAAT
AGAGGAAAGCTTAAAGCCAACCGTTGGGTTATGTACGTCAATGGTGTTCCTAACACGAAC
AGGAAAATGGCAACTATTGGTGGTGCCAAGAATTTTACAATTCACAGTATAGTCAATTGG
ATGAATTCACAGCTGCCAAAACACCCTCGTTTAAAAGCATTTTATCGGTCTATATCGCCG
AGACATTTCTTTAATGGAGAATGGAACACTGGTGGGACCTGTGATAACACTACTCCACTT
TCCGAGGGGAAGGAAGTTCTACAAGATGAATCAAGTGACCCTGATGCAGCAGCAGCTGTA
AGAGGAACAGCTGTTAAGCTTTTAGATATCACTGCTTTATCCCAGCTGAGAGACGAGGGT
CATATATCTCGATACAGCATCAAAGCAACACCTGGAGTCCAGGATTGTTTGCATTGGTGC
TTACCTGGTGTTCCAGATACATGGAACGAAATTCTTTTTGCTCAACTTTAA

Peptide Sequence

PEP ID

XP_016503073.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 14 [Nicotiana tabacum]
Sequence

MKGGLKVSQISLILIGFVCATVLLLAYVKSLFLSSPVLPQNHVLQLSPDLKVKDEEALVE
GSGLGQSEESVNLVSEKYSTYTNSSPAIKVTEELISHDKEALGEGGGSGQVEESVNFESE
KYSTYTNSSPVIKVSEELSTREEIGGGAPNFTKKGDLKDVSDKKIGSIKQQTDVSTPVSS
GGEHSKNLTTTLKRQGCRFAKGRWVVDDSRPLYSGFGCKQWLSSMWACRLTQRTDFEYEK
LRWRPKDCQMDEFTGVKFLKRMQNKTLAFIGDSLGRQQFQSLMCMITGGKDRPNVLDVGH
EYGLVQSRGSARPDGWAYRFPDTKTTILYYWSASLCDLTPINPSDPATDYAMHLDRPPAF
LSHFLPKFDVVVLNTGHHWNRGKLKANRWVMYVNGVPNTNRKMATIGGAKNFTIHSIVNW
MNSQLPKHPRLKAFYRSISPRHFFNGEWNTGGTCDNTTPLSEGKEVLQDESSDPDAAAAV
RGTAVKLLDITALSQLRDEGHISRYSIKATPGVQDCLHWCLPGVPDTWNEILFAQL

Transcript Sequence

Gene sequence data has not been registered.